The following table shows the packages used to develop and run the
diveRpine
package:
Package | Version | Citation |
---|---|---|
base | 4.2.1 | R Core Team (2022) |
DT | 0.26 | Xie et al. (2022) |
grateful | 0.1.11 | Rodríguez-Sánchez et al. (2022) |
knitr | 1.41 | Xie (2014); Xie (2015); Xie (2022) |
landscapeR | 1.2 | Masante (2017) |
markdown | 1.1 | Allaire et al. (2019) |
pkgdown | 2.0.7 | Wickham et al. (2022) |
raster | 3.6.11 | Hijmans (2022) |
rasterVis | 0.51.4 | Perpiñán and Hijmans (2022) |
RColorBrewer | 1.1.3 | Neuwirth (2022) |
Rdpack | 2.4 | Boshnakov (2022) |
rgeos | 0.6.1 | Bivand and Rundel (2022) |
rintrojs | 0.3.2 | Ganz (2016) |
rmarkdown | 2.19 | Xie et al. (2018); Xie et al. (2020); Allaire et al. (2022) |
sf | 1.0.9 | Pebesma (2018) |
shiny | 1.7.4 | Chang et al. (2022) |
shinycssloaders | 1.0.0 | Sali and Attali (2020) |
shinydashboard | 0.7.2 | Chang and Borges Ribeiro (2021) |
shinyjs | 2.1.0 | Attali (2021) |
shinythemes | 1.2.0 | Chang (2021) |
shinyWidgets | 0.7.5 | Perrier et al. (2022) |
sp | 1.5.1 | Pebesma and Bivand (2005); Bivand et al. (2013) |
spelling | 2.2 | Ooms and Hester (2020) |
tidyverse | 1.3.2 | Wickham et al. (2019) |
References
Allaire, J., Horner, J., Xie, Y., Marti, V. and Porte,
N. (2019). Markdown: Render
markdown with the c library ’sundown’. R package version 1.1.
Allaire, J., Xie, Y., McPherson, J., Luraschi, J., Ushey, K.,
Atkins, A., Wickham, H., Cheng, J., Chang, W. and Iannone, R.
(2022). Rmarkdown:
Dynamic documents for r. R package version 2.19.
Attali, D. (2021). Shinyjs: Easily
improve the user experience of your shiny apps in seconds. R
package version 2.1.0.
Bivand, R. and Rundel, C. (2022). Rgeos: Interface to
geometry engine - open source (’GEOS’). R package version
0.6-1.
Bivand, R. S., Pebesma, E. and Gomez-Rubio, V. (2013).
Applied spatial data analysis with
R, second edition. Springer, NY.
Boshnakov, G. N. (2022). Rdpack:
Update and manipulate rd documentation objects.
Chang, W. (2021). Shinythemes:
Themes for shiny. R package version 1.2.0.
Chang, W. and Borges Ribeiro, B. (2021). Shinydashboard:
Create dashboards with ’shiny’. R package version 0.7.2.
Chang, W., Cheng, J., Allaire, J., Sievert, C., Schloerke, B.,
Xie, Y., Allen, J., McPherson, J., Dipert, A. and Borges, B.
(2022). Shiny:
Web application framework for r. R package version 1.7.4.
Ganz, C. (2016). rintrojs: A wrapper for the intro.js library.
Journal of Open Source Software 1,.
Hijmans, R. J. (2022). Raster: Geographic data
analysis and modeling. R package version 3.6-11.
Masante, D. (2017). landscapeR:
Categorical landscape simulation facility. R package version
1.2.
Neuwirth, E. (2022). RColorBrewer:
ColorBrewer palettes. R package version 1.1-3.
Ooms, J. and Hester, J. (2020). Spelling: Tools for
spell checking in r. R package version 2.2.
Pebesma, E. (2018). Simple
Features for R: Standardized Support for Spatial Vector Data.
The R Journal 10, 439–446.
Pebesma, E. J. and Bivand, R. S. (2005). Classes and methods for
spatial data in R. R News 5,
9–13.
Perpiñán, O. and Hijmans, R. (2022). rasterVis. R package version 0.51.4.
Perrier, V., Meyer, F. and Granjon, D. (2022). shinyWidgets:
Custom inputs widgets for shiny. R package version 0.7.5.
R Core Team (2022). R: A language and environment for
statistical computing. Vienna, Austria: R Foundation for
Statistical Computing.
Rodríguez-Sánchez, F., Jackson, C. P. and Hutchins, S.
D. (2022). Grateful: Facilitate citation
of r packages. R package version 0.1.5.
Sali, A. and Attali, D. (2020). Shinycssloaders:
Add loading animations to a ’shiny’ output while it’s
recalculating. R package version 1.0.0.
Wickham, H., Averick, M., Bryan, J., Chang, W., McGowan, L. D.,
François, R., Grolemund, G., Hayes, A., Henry, L., Hester, J., et
al. (2019). Welcome to the tidyverse. Journal of Open Source
Software 4, 1686.
Wickham, H., Hesselberth, J. and Salmon, M. (2022).
Pkgdown: Make
static HTML documentation for a package. R package version
2.0.7.
Xie, Y. (2014). Knitr: A
comprehensive tool for reproducible research in R. In
Implementing reproducible computational research (ed. Stodden,
V.), Leisch, F.), and Peng, R. D.), Chapman; Hall/CRC.
Xie, Y. (2015). Dynamic documents with R
and knitr. ISBN 978-1498716963 2nd ed. Boca Raton, Florida:
Chapman; Hall/CRC.
Xie, Y. (2022). Knitr: A general-purpose package for
dynamic report generation in r. R package version 1.41.
Xie, Y., Allaire, J. J. and Grolemund, G. (2018).
R markdown: The
definitive guide. ISBN 9781138359338 Boca Raton, Florida:
Chapman; Hall/CRC.
Xie, Y., Dervieux, C. and Riederer, E. (2020). R markdown
cookbook. ISBN 9780367563837 Boca Raton, Florida: Chapman;
Hall/CRC.
Xie, Y., Cheng, J. and Tan, X. (2022). DT: A wrapper of the
JavaScript library ’DataTables’. R package version 0.26.